| Species | No. of available genes | 12s rRNA | 16s rRNA | COX1 | COX2 | COX3 | CYTB | MC1R | ND1 | ND3 | ND4 | ND4L | ND5 | PRND | PRP | SRY |
| Bos taurus | 15 | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X |
| Ceratotherium simum | 11 | X | X | X | X | X | X | X | X | X | X | X | ||||
| Dicerorhinus sumatrensis | 11 | X | X | X | X | X | X | X | X | X | X | X | ||||
| Diceros bicornis | 12 | X | X | X | X | X | X | X | X | X | X | X | X | |||
| Equus asinus | 15 | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X |
| Equus burchellii | 5 | X | X | X | X | X | ||||||||||
| Equus caballus | 15 | X | X | X | X | X | X | X | X | X | X | X | X | X | X | X |
| Equus grevyi | 6 | X | X | X | X | X | X | |||||||||
| Equus hemionus | 2 | X | X | |||||||||||||
| Equus kiang | 4 | X | X | X | X | |||||||||||
| Equus przewalskii | 5 | X | X | X | X | X | ||||||||||
| Equus zebra | 5 | X | X | X | X | X | ||||||||||
| Rhinoceros sondaicus | 11 | X | X | X | X | X | X | X | X | X | X | X | ||||
| Rhinoceros unicornis | 11 | X | X | X | X | X | X | X | X | X | X | X | ||||
| Tapirus bairdii | 2 | X | X | |||||||||||||
| Tapirus indicus | 4 | X | X | X | X | |||||||||||
| Tapirus pinchaque | 4 | X | X | X | X | |||||||||||
| Tapirus terrestris | 4 | X | X | X | X | |||||||||||
| Sum: | 142 | 10 | 9 | 12 | 8 | 14 | 8 | 8 | 8 | 8 | 8 | 8 | 8 | 9 | 8 | 7 |